CHNOSZ

Vignettes from package canprot

The data analysis shown in these vignettes is described in a preprint on bioRxiv.

Cancer vs normal tissue

breast Breast Cancer
colorectal Colorectal Cancer
liver Liver Cancer
lung Lung Cancer
pancreatic Pancreatic Cancer
prostate Prostate Cancer

Cell culture experiments

hypoxia Cell Extracts in Hypoxia
secreted Secreted Proteins in Hypoxia
osmotic_euk Hyperosmotic Stress in Eukaryotic Cells
glucose High Glucose
3D 3D Cell Culture

These vignettes show data used in another preprint.

osmotic_bact Hyperosmotic Stress in Bacteria
osmotic_halo Osmotic Stress in Halophiles

Old Vignettes

These vignettes were developed for a 2017 paper in PeerJ and are kept in the "oldvignettes" directory of the package.

basis_comparison Basis Species Comparison
potential_diagrams Potential Diagrams

Last updated: 2020-05-11