JMDplots vignettes

Yeast subcellular location (2009)

This vignette runs the code to make selected plots from the following paper:

Dick JM. 2009. Calculation of the relative metastabilities of proteins in subcellular compartments of Saccharomyces cerevisiae. BMC Systems Biology 3: 75. doi: 10.1186/1752-0509-3-75

These plots have been modified from the original figures to make greater use of color.

This vignette was compiled on 2024-03-11 with JMDplots 1.2.19-11 and CHNOSZ 2.1.0-5.

library(JMDplots)

Oxygen fugacity - activity of H₂O predominance diagrams (Figure 2)

scsc2()

Relative equilibrium abundances of proteins as a function of oxygen fugacity (Figure 3)

scsc3()

JMDplots vignettes

Yeast subcellular location (2009)

Oxygen fugacity - activity of H2O predominance diagrams (Figure 2)

Relative equilibrium abundances of proteins as a function of oxygen fugacity (Figure 3)

Oxygen fugacity - activity of H₂O predominance diagrams (Figure 2)